{"schemaVersion":1,"kind":"project","documentationUrl":"https://decomphub.com/data","project":{"id":"8006e7d7-c29a-4297-a1b2-f3b6048e6139","slug":"pipeline-hmm-chipseq-differential-histone","revision":2,"name":"Pipeline_HMM-ChIPseq-Differential-Histone","description":"This repository provides an educational reimplementation of ChIPDiff (Xu et al., 2008),   a Hidden Markov Model (HMM) pipeline to detect Differential Histone Modification Sites (DHMSs)  from ChIP-seq data.","url":"https://app.decomphub.com/projects/pipeline-hmm-chipseq-differential-histone","jsonUrl":"https://app.decomphub.com/data/projects/pipeline-hmm-chipseq-differential-histone.json","markdownUrl":"https://app.decomphub.com/data/projects/pipeline-hmm-chipseq-differential-histone.md","category":"applications","workTypes":["reimplementation"],"targets":["ChIPDiff"],"status":"unknown","publishedAt":"2026-10-08T10:03:18.459Z","updatedAt":"2026-10-08T10:03:18.459Z","repository":{"url":"https://github.com/meli088/pipeline_hmm-chipseq-differential-histone","host":"github.com","fullPath":"meli088/pipeline_hmm-chipseq-differential-histone","description":"This repository provides an educational reimplementation of ChIPDiff (Xu et al., 2008),   a Hidden Markov Model (HMM) pipeline to detect Differential Histone Modification Sites (DHMSs)  from ChIP-seq data.","license":"MIT","starCount":0,"starsCheckedAt":"2026-10-08T09:00:21.338Z","upstreamArchived":false,"defaultBranch":null,"latestDefaultBranchCommitAt":null,"metadataCheckedAt":"2026-10-08T09:00:21.338Z"},"progress":[],"sources":[{"label":"Public repository metadata","url":"https://github.com/meli088/pipeline_hmm-chipseq-differential-histone"},{"label":"Discovery query","url":"https://api.github.com/search/repositories?q=%22reimplementation%22+in%3Aname%2Cdescription+is%3Apublic+fork%3Afalse+created%3A2025-03-22..2025-10-24&sort=updated&order=desc&per_page=100&page=4"}],"longDescription":"","aliases":[],"originalPlatforms":[],"outputPlatforms":[],"architectures":[],"languages":["Python"],"tags":[],"links":{"website":null,"documentation":null,"releases":null,"buildInstructions":null,"repositories":[],"community":[],"support":[],"issues":[]},"contribution":{"status":"unknown","helpNeeded":[],"url":null,"sourceUrl":null,"checkedAt":null,"prerequisites":"","environments":[],"aiPolicy":"unspecified","aiPolicySourceUrl":null,"aiPolicyConditions":""},"originalAssetsNote":""}}