DecompHub

pySeqAlign

Project status: Unknown

Pure-Python sequence alignment (Smith-Waterman / Needleman-Wunsch) with Prolog-style distance functions and ILP-based rule learning (Aleph, Popper). Reimplementation of the original pyAligner from the ILP 2006 / ICDM 2008 publications.

Target software or hardware
pyAligner
Work type
Reimplementation and compatibility
Primary public repository
github.com/athro/pyseqalign
GitHub
0GitHub stars

Projects are sorted by the latest recorded repository star count. Stars indicate interest, not completion. Missing counts remain unknown.

About and scope

Pure-Python sequence alignment (Smith-Waterman / Needleman-Wunsch) with Prolog-style distance functions and ILP-based rule learning (Aleph, Popper). Reimplementation of the original pyAligner from the ILP 2006 / ICDM 2008 publications.

Contribution availability

Contribution policy unknown

AI-assisted contribution policy
Unspecified

Documented contributor systems

Contributor setup not documented

Reported progress

Progress not reported

Sources, builds and releases