wes-variant-calling-pipeline
Project status: UnknownReproducible Nextflow and Docker reimplementation of a whole-exome sequencing variant-calling pipeline (FastQC, FASTP, BWA, SAMtools, ANNOVAR), based on my MS thesis analysis.
- Target software or hardware
- Work type
- Primary public repository
- github.com/mehwar-1/wes-variant-calling-pipeline
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Reported progress
Checklist completion: ≈50%
WES Variant-Calling Pipeline — Roadmap — 5/10 listed items checked; items are equally weighted
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About and scope
Reproducible Nextflow and Docker reimplementation of a whole-exome sequencing variant-calling pipeline (FastQC, FASTP, BWA, SAMtools, ANNOVAR), based on my MS thesis analysis.
Contribution availability
Contribution policy unknown
- AI-assisted contribution policy
- Unspecified
Documented contributor systems
Contributor setup not documented
Sources, builds and releases
- Open repository · github.comgithub.com/mehwar-1/wes-variant-calling-pipeline